Publications







Dr. Harold Garner has been developing text analytics tools and applying them to important scientific, government and business problems. Many of these have been captured in peer reviewed publications in top tier journals.

1. Harold R. Garner, "The Case of the Stolen Words", Scientific American, March, 2014
2. Harold R. Garner, Lauren McIver, Michael B. Waitzkin, Research funding: Same work, twice the money?, Nature. 2013 Jan 31;493(7434):599-601. doi: 10.1038/493599a. PMID: 23364724
3. Garner HR, Science publishing: How to stop plagiarism: Flag plagiarized studies, Nature 481, 21-23 (05 January 2012)
4. H.R. Garner, Combating unethical publications with plagiarism detection services, Urol Oncol. 2011 Jan-Feb;29(1):95-9.PMID: 21194644
5. Z. Sun, M. Errami, T. Long, C. Renard, N. Choradia, H.R. Garner, Systematic characterizations of text similarity in full text biomedical publications, PLoS ONE 5(9): e12704. doi:10.1371/journal.pone.0012704
6. Errami M, Tassa AT, Galindo CL, Burkart M, Garner HR, Carbamazepine Alone and Especially in Combination with Doxycycline Attenuates Isoproterenol-Induced Cardiac Hypertrophy, Heart Int. 2010 Jun 23;5(1):e7. PMID: 21977292
7. M. Errami, J. Sun, T. Long, A. George and H. R. Garner, Identifying duplicate content using Statistically Improbable Phrases, Bioinformatics. 2010 Jun 1;26(11):1453-7. PMID: 20472545
8. Tara Long, Angela George, Harold R. Garner, Quaere verum: Responding to the editorial, "Primum non Nocere", Clinical Chemistry, 2010 Jan 21 PMID: 20093558
9. Tara C. Long, Mounir Errami, Angela C. George, Zhaohui Sun & Harold R. Garner, Scientific Integrity: Responding to Possible Plagiarism, Science, Vol. 323, 1293-1294, March 6, 2009, PMID: 19265004
10. Errami M, Sun Z, Long TC, George AC and Garner HR, Déjà vu: a Database of Duplicate Citations in the Scientific Literature, Nucleic Acids Res. 2009 Jan;37(Database issue):D921-4. PMID: 18757888.
11. Loadsman JA, Garner HR, Drummond GB, Towards the elimination of plagiarism and redundancy in Anaesthesia and Intensive Care, Anaesth Intensive Care. 2008 Sep;36(5):643-5. PMID: 18853580
12. Errami M and Garner HR, A tale of two citations, Nature 2008 Jan 24;452(7177):397-9 PMID 18216832
13. Errami M,.Hicks JM, Fisher W, Trusty D, Wren JD, Long TC and Garner HR, Deja vu A Study of Duplicate Citations in Medline, Bioinformatics. 2008 Jan 15;24(2):243-9. PMID 18056062
14. Errami M, Wren JD, Hicks JM and Garner HR, eTBLAST: A web server to identify expert reviewers, appropriate journals and similar publications, Nucleic Acids Res. 2007 Jul;35(Web Server issue):W12-5. PMID: 17452348
15. Garner HR, Hicks JM, Wren JD and Errami M, Medline: the knowledge buried therein, its potential and cost, IEEE Eng Med Biol Mag. 2007 May-Jun;26(3):73-4. PMID: 17549924
16. Lewis J, Ossowski S, Hicks J, Errami M., and Garner HR Text Similarity: an alternative way to search MEDLINE, Bioinformatics, 2006 Sep 15;22(18):2298-304. PMID: 16926219
17. Wren JD, Chang JT, Pustejovsky J, Adar E, Garner HR, Altman RB, Biomedical Term Mapping Databases, Nucleic Acids Res. 2005 Jan 1;33 Database Issue PMID: 15608198
18. Pertsemlidis A and Garner HR, Text Comparison Based on Dynamic Programming, IEEE Engineering in Biology and Medicine, Nov./Dec., 2004, Vol. 23, No. 6, pgs. 66-71. PMID: 15688594
19. Jonathan D. Wren, Harold R. Garner, Data-mining analysis suggests an epigenetic pathogenesis for type 2 diabetes, JBB, pgs. 104-112, 2005 PMID: 16046815
20. Wren JD and Garner HR, Shared Relationship Analysis: A Method to Quantitatively Evaluate Cohesion and Commonalities in a Literature-Derived Relationship Network, Bioinformatics, 2004 Jan 22;20(2):191-198. PMID: 14734310
21. Wren JD, Bekeredjian R, Stewart JA, Shohet RV and Garner HR, Knowledge discovery by automated identification and ranking of implicit relationships, Bioinformatics. 2004 Feb 12;20(3):389-98. PMID: 14960466
22. Garner HR and Pertsemlidis A, Applied Computational Biology, invited review, BioSilico, January, 2003.
23. Pertsemlidis A, Prikhodko N, and Garner HR. Text comparison based on dynamic programming. Proceeding of the Pacific Symposium on Biocomputing, Kauai, Hawaii, January 3-7, 2003.
24. Wren, JD and Garner, HR, Heuristics for Identification of Acronym-Definition Patterns within Text: Towards an Automated Construction, Methods of Information in Medicine, Vol. 41, 426-434, 2002. PMID: 12501816
25. Kulkarni, D. Mittelman, N. Williams, A. Pertsemlidis, Y. Lian, H. R. Garner, ARROGANT: an application to manipulate large gene collections, Vol. 18, 1410-1417, BioInformatics, 2002. PMID: 12424110
26. Huang H and Garner HR, "Gene Alert - A Homology Search Results Keyword Parser," IEEE Eng Med Biol Mag. 1998 Mar-Apr;17(2):119-22, 128 PMID: 9548090

Other Articles:
27. Regulators confront blind spots in research oversight, Nature Medicine, News, May, 2009
28. Plagiarism Sleuths, News Focus, Jennifer Couzin-Frankel and Jackie Grom, Science, May, 2006
29. News of the Week, Science, Retractions Put Spotlight on China's Part-Time Professor System, 3/6/2009
30. Nature News, Iranian paper sparks sense of déjà vu, 10/22/2008
31. Nature News, Entire-paper plagiarism caught by software, 10/09/2008
32. Our software, ARGH, was highlighted on the NetWatch column in Science, July 9, 2004, http://www.sciencemag.org/content/vol305/issue5681/netwatch.shtml
33. Our software, eTBLAST, was highlighted on the NetWatch column in Science, May 14, 2004, http://www.sciencemag.org/content/vol304/issue5673/netwatch.shtml

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